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World-2DPAGE Repository
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SWISS-2DPAGE
World-2DPAGE Portal
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Searching in 'World-2DPAGE Repository [0014]' for entry
matching:
SYUB_RAT
World-2DPAGE Repository
(0014):
SYUB_RAT
SYUB_RAT
General information about the entry
View entry in simple text format
Entry name
SYUB_RAT
Primary accession number
Q63754
integrated into World-2DPAGE Repository (0014) on
October 13, 2008 (release 1)
2D Annotations were last modified on
June 1, 2011 (version 3)
General Annotations were last modified on
November 25, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Beta-synuclein; AltName: Full=Phosphoneuroprotein 14; Short=PNP 14;.
Gene name
Name=Sncb
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.200900680
;
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein
RAT_CEREBELLUM_21D
{Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
map experimental info
RAT_CEREBELLUM_21D
MAP LOCATIONS:
SPOT 3243
:
pI=4.41; Mw=14000
[identification data]
IDENTIFICATION:
SPOT 3243: SeqCov=50%. MascotPMF=69 [
1
].
MAPPING (identification):
SPOT
3243
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
PRIDE
10017.
UniProtKB/Swiss-Prot
Q63754; SYUB_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
SYUB_RAT
Primary accession number
Q63754
Secondary accession number(s)
Q5PPN9
Sequence was last modified on
November 1, 1996 (version 1)
Annotations were last modified on
November 16, 2011 (version 77)
Name and origin of the protein
Description
RecName: Full=Beta-synuclein; AltName: Full=Phosphoneuroprotein 14; Short=PNP 14;
Gene name
Name=Sncb
Encoded on
Name=Sncb
Keywords
Complete proteome
;
Cytoplasm
;
Direct protein sequencing
;
Phosphoprotein
;
Reference proteome
;
Repeat
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
D17764; BAA04610.1
; -; mRNA
EMBL
BC087579; AAH87579.1
; -; mRNA
IPI
IPI00211864; -
; .
RefSeq
NP_542955.2; NM_080777.2
; .
UniGene
Rn.20352; -
; .
ProteinModelPortal
Q63754; -
; .
SMR
Q63754; 1-134
; .
STRING
Q63754; -
; .
PhosphoSite
Q63754; -
; .
World-2DPAGE
0004:Q63754; -
; .
PRIDE
Q63754; -
; .
Ensembl
ENSRNOT00000024357; ENSRNOP00000024357
; ENSRNOG00000018039; .
GeneID
113893; -
; .
KEGG
rno:113893; -
; .
UCSC
NM_080777; rat
; .
CTD
6620; -
; .
RGD
70992; Sncb
; .
eggNOG
roNOG18011; -
; .
GeneTree
ENSGT00390000016161; -
; .
HOVERGEN
HBG000481; -
; .
InParanoid
Q63754; -
; .
OrthoDB
EOG40S0HC; -
; .
NextBio
617964; -
; .
ArrayExpress
Q63754; -
; .
Genevestigator
Q63754; -
; .
GermOnline
ENSRNOG00000018039; Rattus norvegicus
; .
GO
GO:0043195; C:terminal button
; IDA:RGD; .
InterPro
IPR001058; Synuclein
; .
InterPro
IPR002461; Synuclein_beta
; .
Gene3D
G3DSA:1.10.287.700; Synuclein
; 1; .
PANTHER
PTHR13820; Synuclein
; 1; .
PANTHER
PTHR13820:SF4; Synuclein_beta
; 1; .
Pfam
PF01387; Synuclein
; 1; .
PRINTS
PR01213; BSYNUCLEIN
; .
PRINTS
PR01211; SYNUCLEIN
; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
ExPASy web server