World-2DPAGE Repository

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.

References

[1]	MAPPING ON GEL PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan] Maurya D.K., Sundaram C.S., Bhargava P. ''Proteome profile of the mature rat olfactory bulb'' Proteomics 9(1):2593-2599 (2009)

2D PAGE maps for identified proteins

How to interpret a protein

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb

map experimental info

OB21DSUB

MAP LOCATIONS:

SPOT 284:

pI=5.86; Mw=57000

[identification data]

MAPPING (identification):

SPOT 284: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India

Cross-references

UniProtKB/Swiss-Prot

Q68FQ0; TCPE_RAT.

2D PAGE maps for identified proteins
How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry name	TCPE_RAT
Primary accession number	Q68FQ0
Secondary accession number(s)	Q6PCT4
Sequence was last modified on	October 11, 2004 (version 1)
Annotations were last modified on	November 16, 2011 (version 67)
Name and origin of the protein
Description	RecName: Full=T-complex protein 1 subunit epsilon; Short=TCP-1-epsilon; AltName: Full=CCT-epsilon;
Gene name	Name=Cct5
Encoded on	Name=Cct5
Keywords	Acetylation; ATP-binding; Chaperone; Complete proteome; Cytoplasm; Cytoskeleton; Direct protein sequencing; Nucleotide-binding; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL	BC059165; AAH59165.1; ALT_SEQ; mRNA
EMBL	BC079441; AAH79441.1; -; mRNA
IPI	IPI00470301; -; .
RefSeq	NP_001004078.1; NM_001004078.1; .
UniGene	Rn.92645; -; .
HSSP	P48425; 1A6D; .
ProteinModelPortal	Q68FQ0; -; .
IntAct	Q68FQ0; 2; .
MINT	MINT-4575257; -; .
STRING	Q68FQ0; -; .
World-2DPAGE	0004:Q68FQ0; -; .
PRIDE	Q68FQ0; -; .
Ensembl	ENSRNOT00000015886; ENSRNOP00000015886; ENSRNOG00000011632; .
GeneID	294864; -; .
KEGG	rno:294864; -; .
NMPDR	fig\|10116.3.peg.15718; -; .
UCSC	NM_001004078; rat; .
CTD	22948; -; .
RGD	735161; Cct5; .
eggNOG	roNOG05285; -; .
HOVERGEN	HBG106507; -; .
InParanoid	Q68FQ0; -; .
OMA	EYGRPFI; -; .
OrthoDB	EOG40P46J; -; .
PhylomeDB	Q68FQ0; -; .
NextBio	638670; -; .
ArrayExpress	Q68FQ0; -; .
Genevestigator	Q68FQ0; -; .
GO	GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell; .
GO	GO:0005524; F:ATP binding; IEA:UniProtKB-KW; .
GO	GO:0051082; F:unfolded protein binding; IEA:InterPro; .
GO	GO:0006457; P:protein folding; IEA:InterPro; .
InterPro	IPR012718; Chap_CCT_epsi; .
InterPro	IPR017998; Chaperone_TCP-1; .
InterPro	IPR002194; Chaperonin_TCP-1_CS; .
InterPro	IPR002423; Cpn60/TCP-1; .
KO	K09497; -; .
PANTHER	PTHR11353:SF25; Chap_CCT_epsi; 1; .
PANTHER	PTHR11353; Cpn60/TCP-1; 1; .
Pfam	PF00118; Cpn60_TCP1; 1; .
PRINTS	PR00304; TCOMPLEXTCP1; .
SUPFAM	SSF48592; GroEL-ATPase; 1; .
TIGRFAMs	TIGR02343; Chap_CCT_epsi; 1; .
PROSITE	PS00750; TCP1_1; 1; .
PROSITE	PS00751; TCP1_2; 1; .
PROSITE	PS00995; TCP1_3; 1; .

World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server

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