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Searching in 'World-2DPAGE Repository [0054]' for entry matching: U2AF2_HUMAN




World-2DPAGE Repository (0054):  U2AF2_HUMAN


U2AF2_HUMAN


General information about the entry
View entry in simple text format
Entry nameU2AF2_HUMAN
Primary accession numberP26368
integrated into World-2DPAGE Repository (0054) on November 28, 2012 (release 1)
2D Annotations were last modified onNovember 28, 2012 (version 1)
General Annotations were last modified on October 23, 2014 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2 auxiliary factor 65 kDa subunit; Short=hU2AF(65); Short=hU2AF65; AltName: Full=U2 snRNP auxiliary factor large subunit;.
Gene nameName=U2AF2
Synonyms=U2AF65
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   2D GEL CHARACTERIZATION
DOI=10.1074/mcp.M112.022947;
Vernocchi S., Battello N., Schmitz S., Revets D., Billing A.M., Turner J.D., Muller C.P.
''Membrane glucocorticoid receptor activation induces proteomic changes aligning with classical glucocorticoid-effects''
Molecular & Cellular Proteomics 12(7):1764-1779 (2013)
2D PAGE maps for identified proteins
How to interpret a protein

HSAPIENS_CCRF-CEM_3-10 {CCRF-CEM cells stimulated with Cort-BSA (internal standard)}
Homo sapiens (Human)
HSAPIENS_CCRF-CEM_3-10
  map experimental info
 
HSAPIENS_CCRF-CEM_3-10

MAP LOCATIONS:
pI=9.19; Mw=53370  [identification data]

%COV: SPOT 633: 40 [1].
SCORE: SPOT 633: 473 [1].
SEARCH ENGINE: SPOT 633: Mascot [1].
MAPPING (identification):
SPOT 633: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Claude P. Muller, Centre de Recherche Public de la Sante / National Public Health Laboratory, Luxembourg
Cross-references
UniProtKB/Swiss-ProtP26368; U2AF2_HUMAN.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 0.0
Entry nameU2AF2_HUMAN
Primary accession numberP26368
Secondary accession number(s) Q96HC5
Sequence was last modified on January 23, 2007 (version 4)
Annotations were last modified on October 1, 2014 (version 168)
Name and origin of the protein
DescriptionRecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2 auxiliary factor 65 kDa subunit; Short=hU2AF(65); Short=hU2AF65; AltName: Full=U2 snRNP auxiliary factor large subunit;
Gene nameName=U2AF2
Synonyms=U2AF65
Encoded onName=U2AF2; Synonyms=U2AF65
Keywords3D-structure; Acetylation; Alternative splicing; Complete proteome; Direct protein sequencing; Hydroxylation; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Reference proteome; Repeat; Repressor; RNA-binding; Spliceosome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLX64044; CAA45409.1; -; mRNA
EMBLCH471135; EAW72404.1; -; Genomic_DNA
EMBLBC008740; AAH08740.1; -; mRNA
EMBLBC030574; AAH30574.1; -; mRNA
CCDSCCDS12933.1; -. [P26368-1]; .
CCDSCCDS46197.1; -. [P26368-2]; .
PIRS20250; S20250; .
RefSeqNP_001012496.1; NM_001012478.1. [P26368-2]; .
RefSeqNP_009210.1; NM_007279.2. [P26368-1]; .
UniGeneHs.528007; -; .
PDB1JMT; X-ray; 2.20 A; B=85-112
PDB1O0P; NMR; -; A=372-475
PDB1OPI; NMR; -; A=372-475
PDB1U2F; NMR; -; A=148-237
PDB2G4B; X-ray; 2.50 A; A=148-336
PDB2HZC; X-ray; 1.47 A; A=148-229
PDB2M0G; NMR; -; B=372-475
PDB2U2F; NMR; -; A=258-342
PDB2YH0; NMR; -; A=148-342
PDB2YH1; NMR; -; A=148-342
PDB3VAF; X-ray; 2.49 A; A/B=148-336
PDB3VAG; X-ray; 2.19 A; A/B=148-336
PDB3VAH; X-ray; 2.50 A; A/B=148-336
PDB3VAI; X-ray; 2.20 A; A/B=148-336
PDB3VAJ; X-ray; 1.90 A; A/B=148-336
PDB3VAK; X-ray; 2.17 A; A/B=148-336
PDB3VAL; X-ray; 2.50 A; A/B/D/I=148-336
PDB3VAM; X-ray; 2.40 A; A/B=148-336
PDB4FXW; X-ray; 2.29 A; A/C=375-475
PDBsum1JMT; -; .
PDBsum1O0P; -; .
PDBsum1OPI; -; .
PDBsum1U2F; -; .
PDBsum2G4B; -; .
PDBsum2HZC; -; .
PDBsum2M0G; -; .
PDBsum2U2F; -; .
PDBsum2YH0; -; .
PDBsum2YH1; -; .
PDBsum3VAF; -; .
PDBsum3VAG; -; .
PDBsum3VAH; -; .
PDBsum3VAI; -; .
PDBsum3VAJ; -; .
PDBsum3VAK; -; .
PDBsum3VAL; -; .
PDBsum3VAM; -; .
PDBsum4FXW; -; .
ProteinModelPortalP26368; -; .
SMRP26368; 148-475; .
BioGrid116466; 129; .
DIPDIP-2154N; -; .
IntActP26368; 49; .
MINTMINT-1192370; -; .
STRING9606.ENSP00000307863; -; .
PhosphoSiteP26368; -; .
DMDM267188; -; .
MaxQBP26368; -; .
PaxDbP26368; -; .
PRIDEP26368; -; .
DNASU11338; -; .
EnsemblENST00000308924; ENSP00000307863; ENSG00000063244. [P26368-1]; .
EnsemblENST00000450554; ENSP00000388475; ENSG00000063244. [P26368-2]; .
GeneID11338; -; .
KEGGhsa:11338; -; .
UCSCuc002qlt.3; human. [P26368-2]; .
UCSCuc002qlu.3; human. [P26368-1]; .
CTD11338; -; .
GeneCardsGC19P056165; -; .
HGNCHGNC:23156; U2AF2; .
HPACAB010910; -; .
HPAHPA041943; -; .
HPAHPA043562; -; .
MIM191318; gene; .
neXtProtNX_P26368; -; .
PharmGKBPA134908683; -; .
eggNOGNOG298004; -; .
HOGENOMHOG000180745; -; .
HOVERGENHBG062169; -; .
InParanoidP26368; -; .
KOK12837; -; .
OMAYARRETR; -; .
OrthoDBEOG7CNZFZ; -; .
PhylomeDBP26368; -; .
TreeFamTF314111; -; .
ReactomeREACT_1597; Transport of Mature mRNA derived from an Intron-Containing Transcript; .
ReactomeREACT_1849; mRNA 3'-end processing; .
ReactomeREACT_467; mRNA Splicing - Major Pathway; .
ChiTaRSU2AF2; human; .
EvolutionaryTraceP26368; -; .
GeneWikiU2AF2; -; .
GenomeRNAi11338; -; .
NextBio43079; -; .
PMAP-CutDBP26368; -; .
PROPR:P26368; -; .
ArrayExpressP26368; -; .
BgeeP26368; -; .
CleanExHS_U2AF2; -; .
GenevestigatorP26368; -; .
GOGO:0016607; C:nuclear speck; IDA:MGI; .
GOGO:0005654; C:nucleoplasm; TAS:Reactome; .
GOGO:0005634; C:nucleus; IDA:HPA; .
GOGO:0005681; C:spliceosomal complex; IDA:HGNC; .
GOGO:0019899; F:enzyme binding; IPI:UniProtKB; .
GOGO:0000166; F:nucleotide binding; IEA:InterPro; .
GOGO:0044822; F:poly(A) RNA binding; IDA:UniProtKB; .
GOGO:0005515; F:protein binding; IPI:UniProtKB; .
GOGO:0010467; P:gene expression; TAS:Reactome; .
GOGO:0031124; P:mRNA 3'-end processing; TAS:Reactome; .
GOGO:0006406; P:mRNA export from nucleus; TAS:Reactome; .
GOGO:0006397; P:mRNA processing; TAS:ProtInc; .
GOGO:0000398; P:mRNA splicing; via spliceosome; IC:HGNC
GOGO:0048025; P:negative regulation of mRNA splicing; via spliceosome; IDA:UniProtKB
GOGO:0008380; P:RNA splicing; TAS:Reactome; .
GOGO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome; .
GOGO:0006366; P:transcription from RNA polymerase II promoter; TAS:Reactome; .
Gene3D3.30.70.330; -; 3; .
InterProIPR012677; Nucleotide-bd_a/b_plait; .
InterProIPR000504; RRM_dom; .
InterProIPR006529; U2AF_lg; .
PfamPF00076; RRM_1; 2; .
SMARTSM00360; RRM; 3; .
TIGRFAMsTIGR01642; U2AF_lg; 1; .
PROSITEPS50102; RRM; 3; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server