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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0021]' for entry matching: UBFD1_MOUSE World-2DPAGE Repository (0021):  UBFD1_MOUSE UBFD1_MOUSE General information about the entry View entry in simple text format Entry name UBFD1_MOUSE Primary accession number Q78JW9 integrated into World-2DPAGE Repository (0021) on  June 9, 2010 (release 1) 2D Annotations were last modified on June 20, 2011 (version 2) General Annotations were last modified on  November 30, 2011 (version 2) Name and origin of the protein Description RecName: Full=Ubiquitin domain-containing protein UBFD1;. Gene name Name=Ubfd1 Synonyms=D7Wsu128e Annotated species Mus musculus (Mouse) [TaxID: 10090] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus. References [1]   2D-PAGE GEL CHARACTERIZATION De Cegli R., Romito A., Iacobacci S., Mao L., Lauria M., Fedele A.O., Klose J., Borel C., Descombes P., Antonarakis S.E., Di Bernardo D., Banfi S., Ballabio A., Cobellis G. ''A mouse Embryonic Stem Cell Bank for inducible overexpression of human Chromosome 21 genes'' Genome Biol 11(6):R64 (2010) 2D PAGE maps for identified proteins How to interpret a protein RUNX1_DAY7 {Mouse embryonic stem cells overexpressing Runx1, Day 7} Mus musculus (Mouse) Tissue: Embryonic stem cell   map experimental info   RUNX1_DAY7 MAP LOCATIONS: SPOT 2813: pI=5.43; Mw=33420   [identification data] EXPRESSION: SPOT 2813: Protein ratio 48h/0h=0.75 [1]. IDENTIFICATION: SPOT 2813: Mascot Protein score=138. SeqCov=12%. Peptides identified=12 [1]. MAPPING (identification): SPOT 2813: Tandem mass spectrometry [1]. Copyright Data from Dr. Lei Mao, Institute of Human Genetics, Charite Universitaetsmedizin Berlin, Germany Cross-references UniProtKB/Swiss-Prot Q78JW9; UBFD1_MOUSE. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_11 Entry name UBFD1_MOUSE Primary accession number Q78JW9 Sequence was last modified on  September 19, 2006 (version 2) Annotations were last modified on  September 21, 2011 (version 56) Name and origin of the protein Description RecName: Full=Ubiquitin domain-containing protein UBFD1; Gene name Name=Ubfd1 Synonyms=D7Wsu128e Encoded on Name=Ubfd1; Synonyms=D7Wsu128e Keywords 3D-structure; Complete proteome; Reference proteome. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL BC011313; AAH11313.2; -; mRNA IPI IPI00131915; -; . RefSeq NP_613055.2; NM_138589.2; . UniGene Mm.282122; -; . PDB 1V86; NMR; -; A=129-217 PDBsum 1V86; -; . ProteinModelPortal Q78JW9; -; . SMR Q78JW9; 142-217; . PhosphoSite Q78JW9; -; . PRIDE Q78JW9; -; . Ensembl ENSMUST00000033158; ENSMUSP00000033158; ENSMUSG00000030870; . GeneID 28018; -; . KEGG mmu:28018; -; . UCSC uc009jof.1; mouse; . CTD 56061; -; . MGI MGI:107301; Ubfd1; . eggNOG roNOG12323; -; . HOGENOM HBG506706; -; . HOVERGEN HBG052799; -; . InParanoid Q78JW9; -; . OMA PHSHRRP; -; . OrthoDB EOG4S7JQ8; -; . NextBio 306530; -; . ArrayExpress Q78JW9; -; . Bgee Q78JW9; -; . CleanEx MM_UBFD1; -; . Genevestigator Q78JW9; -; . InterPro IPR000626; Ubiquitin; . InterPro IPR019954; Ubiquitin_CS; . InterPro IPR019955; Ubiquitin_supergroup; . Pfam PF00240; ubiquitin; 1; . SMART SM00213; UBQ; 1; . PROSITE PS00299; UBIQUITIN_1; 1; . PROSITE PS50053; UBIQUITIN_2; 1; . World-2DPAGE Repository (search AC)