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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0019]' for entry matching: VATB2_RAT World-2DPAGE Repository (0019):  VATB2_RAT VATB2_RAT General information about the entry View entry in simple text format Entry name VATB2_RAT Primary accession number P62815 integrated into World-2DPAGE Repository (0019) on  December 9, 2009 (release 1) 2D Annotations were last modified on May 30, 2011 (version 2) General Annotations were last modified on  January 13, 2012 (version 2) Name and origin of the protein Description RecName: Full=V-type proton ATPase subunit B, brain isoform; Short=V-ATPase subunit B 2; AltName: Full=Endomembrane proton pump 58 kDa subunit; AltName: Full=Vacuolar proton pump subunit B 2;. Gene name Name=Atp6v1b2 Synonyms=Atp6b2, Vat2 Annotated species Rattus norvegicus (Rat) [TaxID: 10116] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus. References [1]   2D-PAGE GEL CHARACTERIZATION DOI=10.1111/j.1471-4159.2010.06719.x; VanGuilder H.D., Yan H., Farley J.A., Sonntag W.E., Freeman W.M. ''Aging alters the expression of neurotransmission-regulating proteins in the hippocampal synaptoproteome'' J of Neurochemistry 113(6):1577-1588 (2010) 2D PAGE maps for identified proteins How to interpret a protein HIPP_SYNAP {Rat hippocampal synaptoproteome} Rattus norvegicus (Rat) Tissue: Hippocampus   map experimental info   HIPP_SYNAP MAP LOCATIONS: SPOT 413: pI=5.57; Mw=56857   [identification data] SPOT 1155: pI=5.57; Mw=56857   [identification data] SPOT 1160: pI=5.57; Mw=56857   [identification data] IDENTIFICATION: SPOT 413: Peptides number=15. SeqCov=36.8%. MOWSE score=2.10E+8 [1] SPOT 1155: Peptides number=14. SeqCov=33.7%. MOWSE score=5.91E+9 [1]; SPOT 1160: Peptides number=14. SeqCov=35.6%. MOWSE score=5.31E+10 [1]. MAPPING (identification): SPOT 413: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]; SPOT 1155: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]; SPOT 1160: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]. Copyright Data from Dr. Willard Freeman, Penn State College of Medicine, USA Cross-references UniProtKB/Swiss-Prot P62815; VATB2_RAT. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_12 Entry name VATB2_RAT Primary accession number P62815 Secondary accession number(s) O09045 P50517 Sequence was last modified on  August 16, 2004 (version 1) Annotations were last modified on  November 16, 2011 (version 70) Name and origin of the protein Description RecName: Full=V-type proton ATPase subunit B, brain isoform; Short=V-ATPase subunit B 2; AltName: Full=Endomembrane proton pump 58 kDa subunit; AltName: Full=Vacuolar proton pump subunit B 2; Gene name Name=Atp6v1b2 Synonyms=Atp6b2, Vat2 Encoded on Name=Atp6v1b2; Synonyms=Atp6b2, Vat2 Keywords Complete proteome; Direct protein sequencing; Hydrogen ion transport; Hydrolase; Ion transport; Membrane; Phosphoprotein; Reference proteome; Transport. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL Y12635; CAA73183.1; -; mRNA EMBL BC085714; AAH85714.1; -; mRNA IPI IPI00199305; -; . RefSeq NP_476561.1; NM_057213.2; . UniGene Rn.8109; -; . ProteinModelPortal P62815; -; . SMR P62815; 53-507; . IntAct P62815; 1; . STRING P62815; -; . PhosphoSite P62815; -; . World-2DPAGE 0004:P62815; -; . PRIDE P62815; -; . Ensembl ENSRNOT00000015931; ENSRNOP00000015931; ENSRNOG00000011891; . GeneID 117596; -; . KEGG rno:117596; -; . UCSC NM_057213; rat; . CTD 526; -; . RGD 620284; Atp6v1b2; . eggNOG roNOG17349; -; . GeneTree ENSGT00550000074724; -; . HOVERGEN HBG002176; -; . InParanoid P62815; -; . OrthoDB EOG4HMJ93; -; . PhylomeDB P62815; -; . NextBio 620435; -; . ArrayExpress P62815; -; . Genevestigator P62815; -; . GermOnline ENSRNOG00000011891; Rattus norvegicus; . GO GO:0005829; C:cytosol; ISS:UniProtKB; . GO GO:0016021; C:integral to membrane; IDA:RGD; . GO GO:0042470; C:melanosome; IEA:UniProtKB-SubCell; . GO GO:0005886; C:plasma membrane; ISS:UniProtKB; . GO GO:0033180; C:proton-transporting V-type ATPase; V1 domain; IEA:InterPro GO GO:0005773; C:vacuole; TAS:GOC; . GO GO:0005524; F:ATP binding; IEA:InterPro; . GO GO:0046933; F:hydrogen ion transporting ATP synthase activity; rotational mechanism; IEA:InterPro GO GO:0046961; F:proton-transporting ATPase activity; rotational mechanism; IEA:InterPro GO GO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro; . GO GO:0007035; P:vacuolar acidification; TAS:RGD; . InterPro IPR020003; ATPase_a/bsu_AS; . InterPro IPR000793; ATPase_F1/V1/A1-cplx_a/bsu_C; . InterPro IPR004100; ATPase_F1/V1/A1-cplx_a/bsu_N; . InterPro IPR000194; ATPase_F1/V1/A1_a/bsu_nucl-bd; . InterPro IPR005723; ATPase_V1-cplx_bsu; . InterPro IPR022879; V-ATPase_su_B/beta; . KO K02147; -; . Pfam PF00006; ATP-synt_ab; 1; . Pfam PF00306; ATP-synt_ab_C; 1; . Pfam PF02874; ATP-synt_ab_N; 1; . TIGRFAMs TIGR01040; V-ATPase_V1_B; 1; . PROSITE PS00152; ATPASE_ALPHA_BETA; 1; . World-2DPAGE Repository (search AC)