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SWISS-2DPAGE

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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: DDX27_HUMAN




SWISS-2DPAGE:  DDX27_HUMAN


DDX27_HUMAN


General information about the entry
View entry in simple text format
Entry nameDDX27_HUMAN
Primary accession numberQ96GQ7
Secondary accession number(s) Q96L97
integrated into SWISS-2DPAGE on May 15, 2003 (release 16)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on May 19, 2011 (version 7)
Name and origin of the protein
DescriptionRecName: Full=Probable ATP-dependent RNA helicase DDX27; EC=3.6.4.13; AltName: Full=DEAD box protein 27;.
Gene nameName=DDX27
Synonyms=RHLP
ORFNames=HSPC259, PP3241
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   MAPPING ON GEL
PubMed=12429849; [NCBI, Expasy, EBI, Israel, Japan]
Scherl A., Coute Y., Deon C., Calle A., Kindbeiter K., Sanchez J.-C., Greco A., Hochstrasser D.F., Diaz J.-J.
''''''Functional proteomic analysis of human nucleolus'';'';''
Mol. Biol. Cell. 13(1):4100-4109(2002)
2D PAGE maps for identified proteins
How to interpret a protein

NUCLEOLI_HELA_1D_HUMAN {SDS-PAGE of nucleolar proteins from Human HeLa cells}
Homo sapiens (Human)
Tissue: Cervix carcinoma
NUCLEOLI_HELA_1D_HUMAN
  map experimental info
  protein estimated location
 
NUCLEOLI_HELA_1D_HUMAN

MAP LOCATIONS:
Mw=90286  [identification data]

MAPPING (identification):
Tandem mass spectrometry [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtQ96GQ7; DDX27_HUMAN.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameDDX27_HUMAN
Primary accession numberQ96GQ7
Secondary accession number(s) A0AVB6 B7ZLY1 Q5VXM7 Q8WYG4 Q969N7 Q96F57 Q96L97 Q9BWY9 Q9BXF0 Q9H990 Q9NWU3 Q9P0C2 Q9UGD6
Sequence was last modified on March 28, 2003 (version 2)
Annotations were last modified on October 19, 2011 (version 102)
Name and origin of the protein
DescriptionRecName: Full=Probable ATP-dependent RNA helicase DDX27; EC=3.6.4.13; AltName: Full=DEAD box protein 27;
Gene nameName=DDX27
Synonyms=RHLP
ORFNames=HSPC259, PP3241
Encoded onName=DDX27; Synonyms=RHLP; ORFNames=HSPC259, PP3241
KeywordsATP-binding; Complete proteome; Helicase; Hydrolase; Nucleotide-binding; Nucleus; Phosphoprotein; Polymorphism; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLAY044431; AAK95821.1; -; mRNA
EMBLAF336851; AAK21271.1; -; mRNA
EMBLAL049766; CAI22427.1; -; Genomic_DNA
EMBLAL357560; CAI22427.1; JOINED; Genomic_DNA
EMBLAL357560; CAH70236.1; -; Genomic_DNA
EMBLAL049766; CAH70236.1; JOINED; Genomic_DNA
EMBLBC009304; AAH09304.2; -; mRNA
EMBLBC011927; AAH11927.2; -; mRNA
EMBLBC016060; AAH16060.2; ALT_INIT; mRNA
EMBLBC126287; AAI26288.1; -; mRNA
EMBLBC130275; AAI30276.1; -; mRNA
EMBLBC144125; AAI44126.1; -; mRNA
EMBLAK022979; BAB14343.1; ALT_INIT; mRNA
EMBLAK000603; BAA91284.1; ALT_INIT; mRNA
EMBLAF193054; AAG22482.1; ALT_FRAME; mRNA
EMBLAF161377; AAF28937.1; ALT_SEQ; mRNA
IPIIPI00293078; -; .
RefSeqNP_060365.7; NM_017895.7; .
UniGeneHs.404263; -; .
UniGeneHs.65234; -; .
ProteinModelPortalQ96GQ7; -; .
SMRQ96GQ7; 211-582; .
IntActQ96GQ7; 5; .
MINTMINT-1420816; -; .
STRINGQ96GQ7; -; .
SWISS-2DPAGEQ96GQ7; -; .
PeptideAtlasQ96GQ7; -; .
PRIDEQ96GQ7; -; .
EnsemblENST00000371764; ENSP00000360828; ENSG00000124228; .
GeneID55661; -; .
KEGGhsa:55661; -; .
UCSCuc002xuh.1; human; .
CTD55661; -; .
GeneCardsGC20P044584; -; .
HGNCHGNC:15837; DDX27; .
neXtProtNX_Q96GQ7; -; .
PharmGKBPA27213; -; .
eggNOGprNOG16476; -; .
GeneTreeENSGT00550000074997; -; .
HOVERGENHBG106162; -; .
InParanoidQ96GQ7; -; .
OMACPSFHLS; -; .
OrthoDBEOG4NVZJV; -; .
PhylomeDBQ96GQ7; -; .
NextBio60399; -; .
ArrayExpressQ96GQ7; -; .
BgeeQ96GQ7; -; .
CleanExHS_DDX27; -; .
GenevestigatorQ96GQ7; -; .
GermOnlineENSG00000124228; Homo sapiens; .
GOGO:0005634; C:nucleus; IEA:UniProtKB-SubCell; .
GOGO:0005524; F:ATP binding; IEA:UniProtKB-KW; .
GOGO:0008026; F:ATP-dependent helicase activity; IEA:InterPro; .
GOGO:0003676; F:nucleic acid binding; IEA:InterPro; .
InterProIPR014001; DEAD-like_helicase; .
InterProIPR011545; DNA/RNA_helicase_DEAD/DEAH_N; .
InterProIPR001650; Helicase_C; .
InterProIPR000629; RNA-helicase_DEAD-box_CS; .
InterProIPR014014; RNA_helicase_DEAD_Q_motif; .
PfamPF00270; DEAD; 1; .
PfamPF00271; Helicase_C; 1; .
SMARTSM00487; DEXDc; 1; .
SMARTSM00490; HELICc; 1; .
PROSITEPS00039; DEAD_ATP_HELICASE; 1; .
PROSITEPS51192; HELICASE_ATP_BIND_1; 1; .
PROSITEPS51194; HELICASE_CTER; 1; .
PROSITEPS51195; Q_MOTIF; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server