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Sample Preparation and Post-separation Analysis

Searching in 'SWISS-2DPAGE' for entry matching: Q14690



General information about the entry
View entry in simple text format
Entry nameRRP5_HUMAN
Primary accession numberQ14690
integrated into SWISS-2DPAGE on May 15, 2003 (release 16)
2D Annotations were last modified onMarch 31, 2004 (version 1)
General Annotations were last modified on May 19, 2011 (version 8)
Name and origin of the protein
DescriptionRecName: Full=Protein RRP5 homolog; AltName: Full=NF-kappa-B-binding protein; Short=NFBP; AltName: Full=Programmed cell death protein 11;.
Gene nameName=PDCD11
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
PubMed=12429849; [NCBI, Expasy, EBI, Israel, Japan]
Scherl A., Coute Y., Deon C., Calle A., Kindbeiter K., Sanchez J.-C., Greco A., Hochstrasser D.F., Diaz J.-J.
''''''Functional proteomic analysis of human nucleolus'';'';''
Mol. Biol. Cell. 13(1):4100-4109(2002)
2D PAGE maps for identified proteins
How to interpret a protein

NUCLEOLI_HELA_1D_HUMAN {SDS-PAGE of nucleolar proteins from Human HeLa cells}
Homo sapiens (Human)
Tissue: Cervix carcinoma
  map experimental info
  protein estimated location

Mw=94000  [identification data]
Mw=94000  [identification data]
Mw=94000  [identification data]
Mw=94000  [identification data]

MAPPING (identification):
Tandem mass spectrometry [1].

This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See or send email from
UniProtKB/Swiss-ProtQ14690; RRP5_HUMAN.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameRRP5_HUMAN
Primary accession numberQ14690
Secondary accession number(s) Q2TA92 Q5W093 Q6P2J3 Q86VQ8 Q9H4P1
Sequence was last modified on April 17, 2007 (version 3)
Annotations were last modified on September 21, 2011 (version 107)
Name and origin of the protein
DescriptionRecName: Full=Protein RRP5 homolog; AltName: Full=NF-kappa-B-binding protein; Short=NFBP; AltName: Full=Programmed cell death protein 11;
Gene nameName=PDCD11
Encoded onName=PDCD11; Synonyms=KIAA0185
Keywords3D-structure; Acetylation; Complete proteome; Direct protein sequencing; Nucleus; Phosphoprotein; Polymorphism; Reference proteome; Repeat; rRNA processing.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLD80007; BAA11502.1; ALT_INIT; mRNA
EMBLAL139339; CAH71487.1; -; Genomic_DNA
EMBLAL591408; CAH71487.1; JOINED; Genomic_DNA
EMBLAL603983; CAH71487.1; JOINED; Genomic_DNA
EMBLAL591408; CAI16749.1; -; Genomic_DNA
EMBLAL139339; CAI16749.1; JOINED; Genomic_DNA
EMBLAL603983; CAI16749.1; JOINED; Genomic_DNA
EMBLAL603983; CAI15102.1; -; Genomic_DNA
EMBLAL139339; CAI15102.1; JOINED; Genomic_DNA
EMBLAL591408; CAI15102.1; JOINED; Genomic_DNA
EMBLCH471066; EAW49641.1; -; Genomic_DNA
EMBLBC049838; AAH49838.1; ALT_SEQ; mRNA
EMBLBC064486; AAH64486.1; ALT_SEQ; mRNA
EMBLBC080560; AAH80560.1; ALT_SEQ; mRNA
EMBLBC111040; AAI11041.1; ALT_SEQ; mRNA
EMBLAY007124; AAG01992.1; ALT_SEQ; mRNA
IPIIPI00400922; -; .
RefSeqNP_055791.1; NM_014976.1; .
UniGeneHs.239499; -; .
PDB1WI5; NMR; -; A=173-278
PDBsum1WI5; -; .
ProteinModelPortalQ14690; -; .
SMRQ14690; 173-278; 280-348; 449-524
533-614633-708; 725-800; 836-913; 1030-1127
1143-13011314-1400; 1605-1687; .
IntActQ14690; 3; .
MINTMINT-1388150; -; .
STRINGQ14690; -; .
PhosphoSiteQ14690; -; .
SWISS-2DPAGEQ14690; -; .
PRIDEQ14690; -; .
EnsemblENST00000369797; ENSP00000358812; ENSG00000148843; .
GeneID22984; -; .
KEGGhsa:22984; -; .
UCSCuc001kwy.1; human; .
CTD22984; -; .
GeneCardsGC10P098787; -; .
H-InvDBHIX0009176; -; .
HGNCHGNC:13408; PDCD11; .
HPACAB026472; -; .
HPAHPA017924; -; .
MIM612333; gene; .
neXtProtNX_Q14690; -; .
PharmGKBPA134909758; -; .
eggNOGprNOG20448; -; .
GeneTreeENSGT00390000012228; -; .
HOGENOMHBG356880; -; .
HOVERGENHBG108419; -; .
InParanoidQ14690; -; .
OrthoDBEOG4XKV63; -; .
PhylomeDBQ14690; -; .
NextBio43819; -; .
ArrayExpressQ14690; -; .
BgeeQ14690; -; .
CleanExHS_PDCD11; -; .
GenevestigatorQ14690; -; .
GermOnlineENSG00000148843; Homo sapiens; .
GOGO:0005730; C:nucleolus; IEA:UniProtKB-SubCell; .
GOGO:0003723; F:RNA binding; IEA:InterPro; .
GOGO:0008134; F:transcription factor binding; IPI:UniProtKB; .
GOGO:0006397; P:mRNA processing; IEA:InterPro; .
GOGO:0006364; P:rRNA processing; IEA:UniProtKB-KW; .
InterProIPR003107; HAT; .
InterProIPR012340; NA-bd_OB-fold; .
InterProIPR016027; NA-bd_OB-fold-like; .
InterProIPR003029; Rbsml_prot_S1_RNA-bd_dom; .
InterProIPR022967; RNA-binding_domain_S1; .
InterProIPR008847; Suf; .
InterProIPR013026; TPR-contain; .
InterProIPR011990; TPR-like_helical; .
Gene3DG3DSA:; OB_NA_bd_sub; 11; .
Gene3DG3DSA:; TPR-like_helical; 2; .
PfamPF00575; S1; 5; .
PfamPF05843; Suf; 1; .
SMARTSM00386; HAT; 7; .
SMARTSM00316; S1; 13; .
SUPFAMSSF50249; Nucleic_acid_OB; 12; .
PROSITEPS50126; S1; 12; .


SWISS-2DPAGE (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server