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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: RL1_ECOLI




SWISS-2DPAGE:  RL1_ECOLI


RL1_ECOLI


General information about the entry
View entry in simple text format
Entry nameRL1_ECOLI
Primary accession numberP0A7L0
Secondary accession number(s) P02384
integrated into SWISS-2DPAGE on December 1, 2000 (release 13)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on May 19, 2011 (version 7)
Name and origin of the protein
DescriptionRecName: Full=50S ribosomal protein L1;.
Gene nameName=rplA
OrderedLocusNames=b3984, JW3947
Annotated speciesEscherichia coli [TaxID: 562]
TaxonomyBacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
References
[1]   MAPPING ON GEL
PubMed=11680886; [NCBI, ExPASy, EBI, Israel, Japan]
Tonella L., Hoogland C., Binz P.-A., Appel R.D., Hochstrasser D.F., Sanchez J.-C.
''''''New perspectives in the Escherichia coli proteome investigation'';'';''
Proteomics 1(1):409-423(2001)
2D PAGE maps for identified proteins
How to interpret a protein

ECOLI6-11 {Escherichia coli(6-11)}
Escherichia coli
ECOLI6-11
  map experimental info
  protein estimated location
 
ECOLI6-11

MAP LOCATIONS:
pI=8.24; Mw=25577  [identification data]

MAPPING (identification):
Peptide mass fingerprinting [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
ECO2DBASEI026.0; 6TH EDITION.
UniProtKB/Swiss-ProtP0A7L0; RL1_ECOLI.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameRL1_ECOLI
Primary accession numberP0A7L0
Secondary accession number(s) P02384 Q2M8S0
Sequence was last modified on January 23, 2007 (version 2)
Annotations were last modified on October 19, 2011 (version 69)
Name and origin of the protein
DescriptionRecName: Full=50S ribosomal protein L1;
Gene nameName=rplA
OrderedLocusNames=b3984, JW3947
Encoded onName=rplA; OrderedLocusNames=b3984, JW3947
Keywords3D-structure; Complete proteome; Direct protein sequencing; Reference proteome; Repressor; Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding; Translation regulation; tRNA-binding.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLV00339; CAA23622.1; -; Genomic_DNA
EMBLU00006; AAC43082.1; -; Genomic_DNA
EMBLU00096; AAC76958.1; -; Genomic_DNA
EMBLAP009048; BAE77336.1; -; Genomic_DNA
PIRS12573; R5EC1; .
RefSeqNP_418411.1; NC_000913.2; .
PDB1ML5; EM; 14.00 A; c=2-229
PDB2GYA; EM; 15.00 A; 2=6-226
PDB2GYC; EM; 15.00 A; 2=6-227
PDB2RDO; EM; 9.10 A; 9=2-234
PDB2WWQ; EM; 5.80 A; 5=1-234
PDB3E1B; EM; 9.00 A; Z=5-211
PDB3E1D; EM; 9.00 A; Z=5-211
PDB3FIK; EM; 6.70 A; 5=1-234
PDB3IZT; EM; -; C=1-234
PDB3IZU; EM; -; C=1-234
PDB3J01; EM; -; 5=1-234
PDB3KCR; EM; -; 5=1-234
PDB487D; EM; 7.50 A; H=29-201
PDBsum1ML5; -; .
PDBsum2GYA; -; .
PDBsum2GYC; -; .
PDBsum2RDO; -; .
PDBsum2WWQ; -; .
PDBsum3E1B; -; .
PDBsum3E1D; -; .
PDBsum3FIK; -; .
PDBsum3IZT; -; .
PDBsum3IZU; -; .
PDBsum3J01; -; .
PDBsum3KCR; -; .
PDBsum487D; -; .
ProteinModelPortalP0A7L0; -; .
SMRP0A7L0; 1-234; .
DIPDIP-35746N; -; .
IntActP0A7L0; 124; .
MINTMINT-1268287; -; .
SWISS-2DPAGEP0A7L0; -; .
ECO2DBASEI026.0; 6TH EDITION; .
PRIDEP0A7L0; -; .
EnsemblBacteriaEBESCT00000000836; EBESCP00000000836; EBESCG00000000697; .
EnsemblBacteriaEBESCT00000018368; EBESCP00000017659; EBESCG00000017422; .
GeneID948483; -; .
GenomeReviewsAP009048_GR; JW3947; .
GenomeReviewsU00096_GR; b3984; .
KEGGecj:JW3947; -; .
KEGGeco:b3984; -; .
EchoBASEEB0857; -; .
EcoGeneEG10864; rplA; .
eggNOGCOG0081; -; .
GeneTreeEBGT00050000010548; -; .
HOGENOMHBG297400; -; .
OMAKAGTVTM; -; .
ProtClustDBPRK05424; -; .
BioCycEcoCyc:EG10864-MONOMER; -; .
GenevestigatorP0A7L0; -; .
GOGO:0015934; C:large ribosomal subunit; IEA:InterPro; .
GOGO:0005515; F:protein binding; IPI:IntAct; .
GOGO:0019843; F:rRNA binding; IEA:UniProtKB-KW; .
GOGO:0003735; F:structural constituent of ribosome; IEA:InterPro; .
GOGO:0000049; F:tRNA binding; IEA:UniProtKB-KW; .
GOGO:0045947; P:negative regulation of translational initiation; IDA:EcoCyc; .
GOGO:0006412; P:translation; IEA:InterPro; .
HAMAPMF_01318_B; Ribosomal_L1_B; 1; -
InterProIPR005878; Ribosom_L1_bac-type; .
InterProIPR002143; Ribosomal_L1; .
InterProIPR016094; Ribosomal_L1_2-a/b-sand; .
InterProIPR016095; Ribosomal_L1_3-a/b-sand; .
InterProIPR023673; Ribosomal_L1_CS; .
InterProIPR023674; Ribosomal_L1_SF; .
Gene3DG3DSA:3.30.190.20; Ribosomal_L1_2-a/b-sand; 2; .
Gene3DG3DSA:3.40.50.790; Ribosomal_L1_3-a/b-sand; 1; .
PfamPF00687; Ribosomal_L1; 1; .
PIRSFPIRSF002155; Ribosomal_L1; 1; .
SUPFAMSSF56808; Ribosomal_L1; 1; .
TIGRFAMsTIGR01169; RplA_bact; 1; .
PROSITEPS01199; RIBOSOMAL_L1; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server