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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: O00567




SWISS-2DPAGE:  O00567


O00567


General information about the entry
View entry in simple text format
Entry nameNOP56_HUMAN
Primary accession numberO00567
integrated into SWISS-2DPAGE on November 9, 2001 (release 15)
2D Annotations were last modified onMay 15, 2003 (version 2)
General Annotations were last modified on May 19, 2011 (version 9)
Name and origin of the protein
DescriptionRecName: Full=Nucleolar protein 56; AltName: Full=Nucleolar protein 5A;.
Gene nameName=NOP56
Synonyms=NOL5A
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   MAPPING ON GEL
PubMed=12429849; [NCBI, ExPASy, EBI, Israel, Japan]
Scherl A., Coute Y., Deon C., Calle A., Kindbeiter K., Sanchez J.-C., Greco A., Hochstrasser D.F., Diaz J.-J.
''''''Functional proteomic analysis of human nucleolus'';'';''
Mol. Biol. Cell. 13(1):4100-4109(2002)
2D PAGE maps for identified proteins
How to interpret a protein

NUCLEOLI_HELA_1D_HUMAN {SDS-PAGE of nucleolar proteins from Human HeLa cells}
Homo sapiens (Human)
Tissue: Cervix carcinoma
NUCLEOLI_HELA_1D_HUMAN
  map experimental info
  protein estimated location
 
NUCLEOLI_HELA_1D_HUMAN

MAP LOCATIONS:
Mw=73806  [identification data]
Mw=70605  [identification data]
Mw=68364  [identification data]

MAPPING (identification):
Tandem mass spectrometry [1]; BANDS 1V88, 1V89: PEPTIDE MASS FINGERPRINTING [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtO00567; NOP56_HUMAN.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameNOP56_HUMAN
Primary accession numberO00567
Secondary accession number(s) Q2M3T6 Q9NQ05
Sequence was last modified on October 31, 2006 (version 4)
Annotations were last modified on October 19, 2011 (version 111)
Name and origin of the protein
DescriptionRecName: Full=Nucleolar protein 56; AltName: Full=Nucleolar protein 5A;
Gene nameName=NOP56
Synonyms=NOL5A
Encoded onName=NOP56; Synonyms=NOL5A
KeywordsComplete proteome; Direct protein sequencing; Nucleus; Phosphoprotein; Polymorphism; Reference proteome; Ribosome biogenesis.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLY12065; CAA72789.1; ALT_INIT; mRNA
EMBLAL049712; CAC01444.2; -; Genomic_DNA
EMBLBC104791; AAI04792.1; -; mRNA
EMBLBC104793; AAI04794.1; -; mRNA
IPIIPI00411937; -; .
RefSeqNP_006383.2; NM_006392.3; .
UniGeneHs.376064; -; .
ProteinModelPortalO00567; -; .
SMRO00567; 6-410; .
IntActO00567; 9; .
STRINGO00567; -; .
PhosphoSiteO00567; -; .
SWISS-2DPAGEO00567; -; .
PRIDEO00567; -; .
EnsemblENST00000329276; ENSP00000370589; ENSG00000101361; .
GeneID10528; -; .
KEGGhsa:10528; -; .
NMPDRfig|9606.3.peg.19735; -; .
UCSCuc002wgh.1; human; .
CTD10528; -; .
GeneCardsGC20P002632; -; .
GeneCardsGC20P002656; -; .
H-InvDBHIX0015577; -; .
HGNCHGNC:15911; NOP56; .
neXtProtNX_O00567; -; .
PharmGKBPA164724063; -; .
HOGENOMHBG611715; -; .
InParanoidO00567; -; .
OMANHIIQAI; -; .
OrthoDBEOG41G342; -; .
PhylomeDBO00567; -; .
ReactomeREACT_17015; Metabolism of proteins; .
NextBio39942; -; .
ArrayExpressO00567; -; .
BgeeO00567; -; .
GenevestigatorO00567; -; .
GermOnlineENSG00000101361; Homo sapiens; .
GOGO:0031428; C:box C/D snoRNP complex; NAS:BHF-UCL; .
GOGO:0070761; C:pre-snoRNP complex; IDA:BHF-UCL; .
GOGO:0005515; F:protein binding; IPI:BHF-UCL; .
GOGO:0030515; F:snoRNA binding; IDA:BHF-UCL; .
GOGO:0006364; P:rRNA processing; TAS:ProtInc; .
InterProIPR012974; NOP5_N; .
InterProIPR012976; NOSIC; .
InterProIPR002687; SnoRNA-bd_dom; .
PfamPF01798; Nop; 1; .
PfamPF08156; NOP5NT; 1; .
PfamPF08060; NOSIC; 1; .
SMARTSM00931; NOSIC; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server