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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: P62701




SWISS-2DPAGE:  P62701


P62701


General information about the entry
View entry in simple text format
Entry nameRS4X_HUMAN
Primary accession numberP62701
Secondary accession number(s) P12750
integrated into SWISS-2DPAGE on November 9, 2001 (release 15)
2D Annotations were last modified onDecember 30, 2004 (version 1)
General Annotations were last modified on May 19, 2011 (version 6)
Name and origin of the protein
DescriptionRecName: Full=40S ribosomal protein S4, X isoform; AltName: Full=SCR10; AltName: Full=Single copy abundant mRNA protein;.
Gene nameName=RPS4X
Synonyms=CCG2, RPS4, SCAR
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   MAPPING ON GEL
PubMed=12429849; [NCBI, ExPASy, EBI, Israel, Japan]
Scherl A., Coute Y., Deon C., Calle A., Kindbeiter K., Sanchez J.-C., Greco A., Hochstrasser D.F., Diaz J.-J.
''''''Functional proteomic analysis of human nucleolus'';'';''
Mol. Biol. Cell. 13(1):4100-4109(2002)
2D PAGE maps for identified proteins
How to interpret a protein

NUCLEOLI_HELA_1D_HUMAN {SDS-PAGE of nucleolar proteins from Human HeLa cells}
Homo sapiens (Human)
Tissue: Cervix carcinoma
NUCLEOLI_HELA_1D_HUMAN
  map experimental info
  protein estimated location
 
NUCLEOLI_HELA_1D_HUMAN

MAP LOCATIONS:
Mw=31824  [identification data]

MAPPING (identification):
Peptide mass fingerprinting and tandem mass SPECTROMETRY [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtP62701; RS4X_HUMAN.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameRS4X_HUMAN
Primary accession numberP62701
Secondary accession number(s) P12631 P12750 P27576 P55831 Q14727 Q6IPY4
Sequence was last modified on January 23, 2007 (version 2)
Annotations were last modified on October 19, 2011 (version 77)
Name and origin of the protein
DescriptionRecName: Full=40S ribosomal protein S4, X isoform; AltName: Full=SCR10; AltName: Full=Single copy abundant mRNA protein;
Gene nameName=RPS4X
Synonyms=CCG2, RPS4, SCAR
Encoded onName=RPS4X; Synonyms=CCG2, RPS4, SCAR
KeywordsAcetylation; Complete proteome; Cytoplasm; Direct protein sequencing; Phosphoprotein; Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLM58458; AAA63255.1; -; mRNA
EMBLAF041428; AAB96968.1; -; Genomic_DNA
EMBLCR456735; CAG33016.1; -; mRNA
EMBLBC000472; AAH00472.1; -; mRNA
EMBLBC071662; AAH71662.1; -; mRNA
EMBLBC100903; AAI00904.1; -; mRNA
EMBLBC100904; AAI00905.1; -; mRNA
EMBLZ70767; CAA94808.1; -; mRNA
EMBLM22146; AAA36597.1; -; mRNA
IPIIPI00217030; -; .
PIRB36338; R3HU4X; .
RefSeqNP_000998.1; NM_001007.4; .
UniGeneHs.118076; -; .
ProteinModelPortalP62701; -; .
SMRP62701; 43-242; .
IntActP62701; 14; .
MINTMINT-1159032; -; .
STRINGP62701; -; .
PhosphoSiteP62701; -; .
SWISS-2DPAGEP62701; -; .
PeptideAtlasP62701; -; .
PRIDEP62701; -; .
EnsemblENST00000316084; ENSP00000362744; ENSG00000198034; .
GeneID6191; -; .
KEGGhsa:6191; -; .
UCSCuc004ear.1; human; .
CTD6191; -; .
GeneCardsGC0XM065247; -; .
H-InvDBHIX0016868; -; .
HGNCHGNC:10424; RPS4X; .
HPAHPA000857; -; .
MIM312760; gene; .
neXtProtNX_P62701; -; .
eggNOGprNOG13250; -; .
HOVERGENHBG000935; -; .
InParanoidP62701; -; .
OMAQLNLHDG; -; .
OrthoDBEOG4QC161; -; .
PhylomeDBP62701; -; .
ReactomeREACT_13698; Regulation of beta-cell development; .
ReactomeREACT_15380; Diabetes pathways; .
ReactomeREACT_17015; Metabolism of proteins; .
ReactomeREACT_1762; 3' -UTR-mediated translational regulation; .
ReactomeREACT_21257; Metabolism of RNA; .
ReactomeREACT_6167; Influenza Infection; .
ReactomeREACT_71; Gene Expression; .
NextBio24041; -; .
PMAP-CutDBP62701; -; .
ArrayExpressP62701; -; .
BgeeP62701; -; .
CleanExHS_RPS4X; -; .
GenevestigatorP62701; -; .
GermOnlineENSG00000198034; Homo sapiens; .
GOGO:0022627; C:cytosolic small ribosomal subunit; IDA:UniProtKB; .
GOGO:0005844; C:polysome; IDA:UniProtKB; .
GOGO:0019843; F:rRNA binding; IEA:UniProtKB-KW; .
GOGO:0003735; F:structural constituent of ribosome; IMP:UniProtKB; .
GOGO:0031018; P:endocrine pancreas development; TAS:Reactome; .
GOGO:0016071; P:mRNA metabolic process; TAS:Reactome; .
GOGO:0008284; P:positive regulation of cell proliferation; IMP:UniProtKB; .
GOGO:0045727; P:positive regulation of translation; IMP:UniProtKB; .
GOGO:0006414; P:translational elongation; TAS:Reactome; .
GOGO:0006415; P:translational termination; TAS:Reactome; .
GOGO:0019083; P:viral transcription; TAS:Reactome; .
InterProIPR005824; KOW; .
InterProIPR000876; Ribosomal_S4e; .
InterProIPR013845; Ribosomal_S4e_central; .
InterProIPR013843; Ribosomal_S4e_N; .
InterProIPR018199; Ribosomal_S4e_N_CS; .
InterProIPR002942; S4_RNA-bd; .
PANTHERPTHR11581; Ribosomal_S4E; 1; .
PfamPF00467; KOW; 1; .
PfamPF00900; Ribosomal_S4e; 1; .
PfamPF08071; RS4NT; 1; .
PfamPF01479; S4; 1; .
PIRSFPIRSF002116; Ribosomal_S4; 1; .
ProDomPD002667; Ribosomal_S4e_central; 1; .
SMARTSM00363; S4; 1; .
PROSITEPS00528; RIBOSOMAL_S4E; 1; .
PROSITEPS50889; S4; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server