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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: Q15397




SWISS-2DPAGE:  Q15397


Q15397


General information about the entry
View entry in simple text format
Entry nameK0020_HUMAN
Primary accession numberQ15397
integrated into SWISS-2DPAGE on November 9, 2001 (release 15)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on May 19, 2011 (version 7)
Name and origin of the protein
DescriptionRecName: Full=Pumilio domain-containing protein KIAA0020; AltName: Full=HBV X-transactivated gene 5 protein; AltName: Full=HBV XAg-transactivated protein 5; AltName: Full=Minor histocompatibility antigen HA-8; Short=HLA-HA8;.
Gene nameName=KIAA0020
Synonyms=XTP5
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   MAPPING ON GEL
PubMed=12429849; [NCBI, ExPASy, EBI, Israel, Japan]
Scherl A., Coute Y., Deon C., Calle A., Kindbeiter K., Sanchez J.-C., Greco A., Hochstrasser D.F., Diaz J.-J.
''''''Functional proteomic analysis of human nucleolus'';'';''
Mol. Biol. Cell. 13(1):4100-4109(2002)
2D PAGE maps for identified proteins
How to interpret a protein

NUCLEOLI_HELA_1D_HUMAN {SDS-PAGE of nucleolar proteins from Human HeLa cells}
Homo sapiens (Human)
Tissue: Cervix carcinoma
NUCLEOLI_HELA_1D_HUMAN
  map experimental info
  protein estimated location
 
NUCLEOLI_HELA_1D_HUMAN

MAP LOCATIONS:
Mw=68364  [identification data]

MAPPING (identification):
Tandem mass spectrometry [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtQ15397; K0020_HUMAN.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameK0020_HUMAN
Primary accession numberQ15397
Secondary accession number(s) A8K804 Q547G7 Q5SZY9 Q6IB47 Q96B27 Q96L78 Q96L79 Q96L80
Sequence was last modified on November 8, 2005 (version 3)
Annotations were last modified on September 21, 2011 (version 106)
Name and origin of the protein
DescriptionRecName: Full=Pumilio domain-containing protein KIAA0020; AltName: Full=HBV X-transactivated gene 5 protein; AltName: Full=HBV XAg-transactivated protein 5; AltName: Full=Minor histocompatibility antigen HA-8; Short=HLA-HA8;
Gene nameName=KIAA0020
Synonyms=XTP5
Encoded onName=KIAA0020; Synonyms=XTP5
KeywordsComplete proteome; Direct protein sequencing; Nucleus; Polymorphism; Reference proteome; Repeat; RNA-binding.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLAK292169; BAF84858.1; -; mRNA
EMBLAL354723; CAI15123.2; ALT_SEQ; Genomic_DNA
EMBLAL589675; CAI15123.2; JOINED; Genomic_DNA
EMBLAL589675; CAI12924.2; ALT_SEQ; Genomic_DNA
EMBLAL354723; CAI12924.2; JOINED; Genomic_DNA
EMBLCH471071; EAW58802.1; -; Genomic_DNA
EMBLBC016137; AAH16137.2; -; mRNA
EMBLD13645; BAA02808.1; ALT_INIT; mRNA
EMBLAF490254; AAO85462.1; -; mRNA
EMBLCR456957; CAG33238.1; -; mRNA
EMBLAY047588; AAL06072.1; -; mRNA
EMBLAY047589; AAL06073.1; -; mRNA
EMBLAY047590; AAL06074.1; -; mRNA
IPIIPI00791325; -; .
RefSeqNP_055693.4; NM_014878.4; .
UniGeneHs.493309; -; .
ProteinModelPortalQ15397; -; .
IntActQ15397; 1; .
MINTMINT-1404790; -; .
STRINGQ15397; -; .
PhosphoSiteQ15397; -; .
SWISS-2DPAGEQ15397; -; .
PRIDEQ15397; -; .
EnsemblENST00000397885; ENSP00000380982; ENSG00000080608; .
GeneID9933; -; .
KEGGhsa:9933; -; .
UCSCuc003zhp.1; human; .
CTD9933; -; .
GeneCardsGC09M002720; -; .
HGNCHGNC:29676; KIAA0020; .
HPAHPA002353; -; .
MIM609960; gene; .
neXtProtNX_Q15397; -; .
PharmGKBPA134895115; -; .
eggNOGprNOG13919; -; .
GeneTreeENSGT00390000015757; -; .
HOVERGENHBG052166; -; .
InParanoidQ15397; -; .
OrthoDBEOG4X3H13; -; .
PhylomeDBQ15397; -; .
NextBio37470; -; .
ArrayExpressQ15397; -; .
BgeeQ15397; -; .
CleanExHS_KIAA0020; -; .
GenevestigatorQ15397; -; .
GermOnlineENSG00000080608; Homo sapiens; .
GOGO:0005783; C:endoplasmic reticulum; IDA:UniProtKB; .
GOGO:0005730; C:nucleolus; IDA:HPA; .
GOGO:0003723; F:RNA binding; IEA:UniProtKB-KW; .
InterProIPR011989; ARM-like; .
InterProIPR016024; ARM-type_fold; .
InterProIPR012959; CPL; .
InterProIPR001313; Pumilio_RNA-bd_rpt; .
Gene3DG3DSA:1.25.10.10; ARM-like; 2; .
PfamPF08144; CPL; 1; .
SMARTSM00025; Pumilio; 6; .
SUPFAMSSF48371; ARM-type_fold; 2; .
PROSITEPS50302; PUM; 5; .
PROSITEPS50303; PUM_HD; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server