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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: P0AE18




SWISS-2DPAGE:  P0AE18


P0AE18


General information about the entry
View entry in simple text format
Entry nameAMPM_ECOLI
Primary accession numberP0AE18
Secondary accession number(s) P07906
integrated into SWISS-2DPAGE on August 1, 1995 (release 2)
2D Annotations were last modified onMay 15, 2003 (version 3)
General Annotations were last modified on May 19, 2011 (version 10)
Name and origin of the protein
DescriptionRecName: Full=Methionine aminopeptidase; Short=MAP; EC=3.4.11.18; AltName: Full=Peptidase M;.
Gene nameName=map
OrderedLocusNames=b0168, JW0163
Annotated speciesEscherichia coli [TaxID: 562]
TaxonomyBacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
References
[1]   MAPPING ON GEL
MEDLINE=96314059; PubMed=8740179; [NCBI, ExPASy, EBI, Israel, Japan]
Pasquali C., Frutiger S., Wilkins M.R., Hughes G.J., Appel R.D., Bairoch A., Schaller D., Sanchez J.-C., Hochstrasser D.F.
''''''Two-dimensional gel electrophoresis of Escherichia coli homogenates: the Escherichia coli SWISS-2DPAGE database'';'';''
Electrophoresis 17(1):547-555(1996)
[2]   MAPPING ON GEL
Vanbogelen R.A., Abshire K.Z., Pertsemlidis A., Clark R.L., Neidhardt F.C.
''''''Gene-protein database of Escherichia coli K-12, edition 6'';'';''
(IN) Neidhardt et al. (eds.)Escherichia coli and Salmonella: Cellular and Molecular Biology (2nd ed.), pp.2067-2117, ASM Press, Washington DC (1996)
[3]   MAPPING ON GEL
PubMed=11680886; [NCBI, ExPASy, EBI, Israel, Japan]
Tonella L., Hoogland C., Binz P.-A., Appel R.D., Hochstrasser D.F., Sanchez J.-C.
''''''New perspectives in the Escherichia coli proteome investigation'';'';''
Proteomics 1(1):409-423(2001)
Comments
  • SUBUNIT: MONOMER
2D PAGE maps for identified proteins
How to interpret a protein

ECOLI {Escherichia coli}
Escherichia coli
ECOLI
  map experimental info
  protein estimated location
 
ECOLI

MAP LOCATIONS:
pI=5.66; Mw=33904

MAPPING (identification):
GEL MATCHING [1] AND IDENTIFIED ON 2-D GELS BY VANBOGELEN [2].



ECOLI5.5-6.7 {Escherichia coli(5.5-6.7)}
Escherichia coli
ECOLI5.5-6.7
  map experimental info
  protein estimated location
 
ECOLI5.5-6.7

MAP LOCATIONS:
pI=5.81; Mw=37872

MAPPING (identification):
GEL MATCHING WITH ECOLI5-6 [3].



ECOLI5-6 {Escherichia coli(5-6)}
Escherichia coli
ECOLI5-6
  map experimental info
  protein estimated location
 
ECOLI5-6

MAP LOCATIONS:
pI=5.71; Mw=38478  [identification data]

MAPPING (identification):
Peptide mass fingerprinting [3].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
ECO2DBASEF029.7; 6TH EDITION.
UniProtKB/Swiss-ProtP0AE18; AMPM_ECOLI.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameAMPM_ECOLI
Primary accession numberP0AE18
Secondary accession number(s) P07906
Sequence was last modified on August 1, 1988 (version 1)
Annotations were last modified on October 19, 2011 (version 64)
Name and origin of the protein
DescriptionRecName: Full=Methionine aminopeptidase; Short=MAP; EC=3.4.11.18; AltName: Full=Peptidase M;
Gene nameName=map
OrderedLocusNames=b0168, JW0163
Encoded onName=map; OrderedLocusNames=b0168, JW0163
Keywords3D-structure; Aminopeptidase; Cobalt; Complete proteome; Direct protein sequencing; Hydrolase; Metal-binding; Protease; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLM15106; AAA24112.1; -; Genomic_DNA
EMBLU70214; AAB08597.1; -; Genomic_DNA
EMBLU00096; AAC73279.1; -; Genomic_DNA
EMBLAP009048; BAB96743.1; -; Genomic_DNA
PIRA27761; DPECM; .
RefSeqNP_414710.1; NC_000913.2; .
PDB1C21; X-ray; 1.80 A; A=2-264
PDB1C22; X-ray; 1.75 A; A=2-264
PDB1C23; X-ray; 2.00 A; A=2-264
PDB1C24; X-ray; 1.70 A; A=2-264
PDB1C27; X-ray; 1.95 A; A=2-264
PDB1MAT; X-ray; 2.40 A; A=1-264
PDB1XNZ; X-ray; 1.52 A; A=1-264
PDB1YVM; X-ray; 1.60 A; A=1-264
PDB2BB7; X-ray; 1.70 A; A=1-264
PDB2EVC; X-ray; 1.60 A; A=1-264
PDB2EVM; X-ray; 1.70 A; A=1-264
PDB2EVO; X-ray; 1.70 A; A/B=1-264
PDB2GG0; X-ray; 1.28 A; A=2-264
PDB2GG2; X-ray; 1.00 A; A=2-264
PDB2GG3; X-ray; 1.45 A; A=2-264
PDB2GG5; X-ray; 2.12 A; A=2-264
PDB2GG7; X-ray; 1.12 A; A=2-264
PDB2GG8; X-ray; 1.80 A; A=2-264
PDB2GG9; X-ray; 1.05 A; A=2-264
PDB2GGB; X-ray; 2.13 A; A=2-264
PDB2GGC; X-ray; 1.00 A; A=2-264
PDB2GTX; X-ray; 2.00 A; A/B=4-264
PDB2GU4; X-ray; 1.80 A; A/B=4-264
PDB2GU5; X-ray; 1.60 A; A/B=4-264
PDB2GU6; X-ray; 1.70 A; A/B=4-264
PDB2GU7; X-ray; 2.00 A; A/B=4-264
PDB2MAT; X-ray; 1.90 A; A=1-264
PDB2P98; X-ray; 1.70 A; A=2-263
PDB2P99; X-ray; 1.80 A; A=2-262
PDB2P9A; X-ray; 1.60 A; A=2-263
PDB2Q92; X-ray; 1.90 A; A=2-263
PDB2Q93; X-ray; 1.60 A; A=2-264
PDB2Q94; X-ray; 1.63 A; A=2-263
PDB2Q95; X-ray; 1.70 A; A=2-264
PDB2Q96; X-ray; 1.60 A; A=2-264
PDB3D27; X-ray; 2.20 A; A=4-264
PDB3MAT; X-ray; 2.00 A; A=1-264
PDB4MAT; X-ray; 2.00 A; A=1-264
PDBsum1C21; -; .
PDBsum1C22; -; .
PDBsum1C23; -; .
PDBsum1C24; -; .
PDBsum1C27; -; .
PDBsum1MAT; -; .
PDBsum1XNZ; -; .
PDBsum1YVM; -; .
PDBsum2BB7; -; .
PDBsum2EVC; -; .
PDBsum2EVM; -; .
PDBsum2EVO; -; .
PDBsum2GG0; -; .
PDBsum2GG2; -; .
PDBsum2GG3; -; .
PDBsum2GG5; -; .
PDBsum2GG7; -; .
PDBsum2GG8; -; .
PDBsum2GG9; -; .
PDBsum2GGB; -; .
PDBsum2GGC; -; .
PDBsum2GTX; -; .
PDBsum2GU4; -; .
PDBsum2GU5; -; .
PDBsum2GU6; -; .
PDBsum2GU7; -; .
PDBsum2MAT; -; .
PDBsum2P98; -; .
PDBsum2P99; -; .
PDBsum2P9A; -; .
PDBsum2Q92; -; .
PDBsum2Q93; -; .
PDBsum2Q94; -; .
PDBsum2Q95; -; .
PDBsum2Q96; -; .
PDBsum3D27; -; .
PDBsum3MAT; -; .
PDBsum4MAT; -; .
ProteinModelPortalP0AE18; -; .
SMRP0AE18; 2-264; .
DIPDIP-48040N; -; .
IntActP0AE18; 25; .
MINTMINT-1219572; -; .
MEROPSM24.001; -; .
SWISS-2DPAGEP0AE18; -; .
ECO2DBASEF029.7; 6TH EDITION; .
EnsemblBacteriaEBESCT00000000850; EBESCP00000000850; EBESCG00000000708; .
EnsemblBacteriaEBESCT00000015484; EBESCP00000014775; EBESCG00000014544; .
GeneID947882; -; .
GenomeReviewsAP009048_GR; JW0163; .
GenomeReviewsU00096_GR; b0168; .
KEGGecj:JW0163; -; .
KEGGeco:b0168; -; .
EchoBASEEB0565; -; .
EcoGeneEG10570; map; .
eggNOGCOG0024; -; .
GeneTreeEBGT00050000010664; -; .
HOGENOMHBG299384; -; .
OMAENGCEIM; -; .
ProtClustDBPRK05716; -; .
BioCycEcoCyc:EG10570-MONOMER; -; .
BioCycMetaCyc:EG10570-MONOMER; -; .
BindingDBP0AE18; -; .
GenevestigatorP0AE18; -; .
GOGO:0008198; F:ferrous iron binding; IDA:EcoCyc; .
GOGO:0070006; F:metalloaminopeptidase activity; IDA:EcoCyc; .
GOGO:0070084; P:protein initiator methionine removal; IDA:EcoCyc; .
GOGO:0006508; P:proteolysis; IEA:InterPro; .
InterProIPR001714; Pept_M24_MAP; .
InterProIPR000994; Pept_M24_structural-domain; .
InterProIPR002467; Pept_M24A_MAP1; .
Gene3DG3DSA:3.90.230.10; Peptidase_M24_cat_core; 1; .
PfamPF00557; Peptidase_M24; 1; .
PRINTSPR00599; MAPEPTIDASE; .
SUPFAMSSF55920; Peptidase_M24_cat_core; 1; .
TIGRFAMsTIGR00500; Met_pdase_I; 1; .
PROSITEPS00680; MAP_1; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server